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tooluniverse

io.github.mims-harvard/tooluniverse · version 1.5.9

Community listing. Not installed or verified by cosmic-mcp. Read the source and its permissions before you run it.

2,700+ scientific tools for AI scientists: life science, research, literature, and more.

https://github.com/mims-harvard/ToolUniverse

Quick facts

  • Listing: Community
  • Published Nov 5, 05:11 UTC
  • Transport: stdio
  • Package: pypi tooluniverse 1.5.9
  • Listed by cosmic-mcp: Nov 9, 04:26 UTC

Science and research

Setup snippets

Generated from the registry entry. cosmic-mcp has not run or reviewed this server; values in angle brackets are yours to fill in.

Run it locally (pypi)

uvx 'tooluniverse==1.5.9'

Claude Desktop (claude_desktop_config.json)

{
  "mcpServers": {
    "tooluniverse": {
      "args": [
        "tooluniverse==1.5.9"
      ],
      "command": "uvx",
      "env": {
        "ANTHROPIC_API_KEY": "<your anthropic api key>",
        "AZURE_OPENAI_API_KEY": "<your azure openai api key>",
        "BIOGRID_API_KEY": "<your biogrid api key>",
        "BRENDA_EMAIL": "<your brenda email>",
        "BRENDA_PASSWORD": "<your brenda password>",
        "DISGENET_API_KEY": "<your disgenet api key>",
        "GEMINI_API_KEY": "<your gemini api key>",
        "HF_TOKEN": "<your hf token>",
        "NCBI_API_KEY": "<your ncbi api key>",
        "NVIDIA_API_KEY": "<your nvidia api key>",
        "OMIM_API_KEY": "<your omim api key>",
        "ONCOKB_API_TOKEN": "<your oncokb api token>",
        "OPENAI_API_KEY": "<your openai api key>",
        "OPENROUTER_API_KEY": "<your openrouter api key>",
        "SEMANTIC_SCHOLAR_API_KEY": "<your semantic scholar api key>",
        "UMLS_API_KEY": "<your umls api key>",
        "USPTO_API_KEY": "<your uspto api key>"
      }
    }
  }
}

Claude Code

claude mcp add 'tooluniverse' -- uvx 'tooluniverse==1.5.9'

Cursor (.cursor/mcp.json)

{
  "mcpServers": {
    "tooluniverse": {
      "args": [
        "tooluniverse==1.5.9"
      ],
      "command": "uvx",
      "env": {
        "ANTHROPIC_API_KEY": "<your anthropic api key>",
        "AZURE_OPENAI_API_KEY": "<your azure openai api key>",
        "BIOGRID_API_KEY": "<your biogrid api key>",
        "BRENDA_EMAIL": "<your brenda email>",
        "BRENDA_PASSWORD": "<your brenda password>",
        "DISGENET_API_KEY": "<your disgenet api key>",
        "GEMINI_API_KEY": "<your gemini api key>",
        "HF_TOKEN": "<your hf token>",
        "NCBI_API_KEY": "<your ncbi api key>",
        "NVIDIA_API_KEY": "<your nvidia api key>",
        "OMIM_API_KEY": "<your omim api key>",
        "ONCOKB_API_TOKEN": "<your oncokb api token>",
        "OPENAI_API_KEY": "<your openai api key>",
        "OPENROUTER_API_KEY": "<your openrouter api key>",
        "SEMANTIC_SCHOLAR_API_KEY": "<your semantic scholar api key>",
        "UMLS_API_KEY": "<your umls api key>",
        "USPTO_API_KEY": "<your uspto api key>"
      }
    }
  }
}

VS Code (.vscode/mcp.json)

{
  "servers": {
    "tooluniverse": {
      "args": [
        "tooluniverse==1.5.9"
      ],
      "command": "uvx",
      "env": {
        "ANTHROPIC_API_KEY": "<your anthropic api key>",
        "AZURE_OPENAI_API_KEY": "<your azure openai api key>",
        "BIOGRID_API_KEY": "<your biogrid api key>",
        "BRENDA_EMAIL": "<your brenda email>",
        "BRENDA_PASSWORD": "<your brenda password>",
        "DISGENET_API_KEY": "<your disgenet api key>",
        "GEMINI_API_KEY": "<your gemini api key>",
        "HF_TOKEN": "<your hf token>",
        "NCBI_API_KEY": "<your ncbi api key>",
        "NVIDIA_API_KEY": "<your nvidia api key>",
        "OMIM_API_KEY": "<your omim api key>",
        "ONCOKB_API_TOKEN": "<your oncokb api token>",
        "OPENAI_API_KEY": "<your openai api key>",
        "OPENROUTER_API_KEY": "<your openrouter api key>",
        "SEMANTIC_SCHOLAR_API_KEY": "<your semantic scholar api key>",
        "UMLS_API_KEY": "<your umls api key>",
        "USPTO_API_KEY": "<your uspto api key>"
      },
      "type": "stdio"
    }
  }
}

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