cosmic-mcp

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AMR (antimicrobial resistance)

io.github.pabloestepaa/amr-mcp ยท version 0.1.4

Community listing. Not installed or verified by cosmic-mcp. Read the source and its permissions before you run it.

Antimicrobial resistance genes, sequences and literature from NCBI and UniProt

https://github.com/pabloestepaa/amr-mcp

Quick facts

  • Listing: Community
  • Published Nov 6, 11:09 UTC
  • Transport: stdio
  • Package: pypi amr-mcp 0.1.4
  • Listed by cosmic-mcp: Nov 9, 04:26 UTC

Other

Setup snippets

Generated from the registry entry. cosmic-mcp has not run or reviewed this server; values in angle brackets are yours to fill in.

Run it locally (pypi)

uvx 'amr-mcp==0.1.4'

Claude Desktop (claude_desktop_config.json)

{
  "mcpServers": {
    "amr-mcp": {
      "args": [
        "amr-mcp==0.1.4"
      ],
      "command": "uvx",
      "env": {
        "NCBI_API_KEY": "<your ncbi api key>",
        "NCBI_EMAIL": "<your ncbi email>"
      }
    }
  }
}

Claude Code

claude mcp add 'amr-mcp' -- uvx 'amr-mcp==0.1.4'

Cursor (.cursor/mcp.json)

{
  "mcpServers": {
    "amr-mcp": {
      "args": [
        "amr-mcp==0.1.4"
      ],
      "command": "uvx",
      "env": {
        "NCBI_API_KEY": "<your ncbi api key>",
        "NCBI_EMAIL": "<your ncbi email>"
      }
    }
  }
}

VS Code (.vscode/mcp.json)

{
  "servers": {
    "amr-mcp": {
      "args": [
        "amr-mcp==0.1.4"
      ],
      "command": "uvx",
      "env": {
        "NCBI_API_KEY": "<your ncbi api key>",
        "NCBI_EMAIL": "<your ncbi email>"
      },
      "type": "stdio"
    }
  }
}

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