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biolit

io.github.rachadele/biolit · version 0.1.25

Community listing. Not installed or verified by cosmic-mcp. Read the source and its permissions before you run it.

LLM-assisted biomedical literature screening and extraction for PubMed, GEO, and preprints.

https://github.com/rachadele/biolit

Quick facts

  • Listing: Community
  • Published Apr 1, 19:05 UTC
  • Transport: stdio
  • Package: pypi biolit 0.1.25
  • Listed by cosmic-mcp: Nov 8, 19:00 UTC

Science and research

Setup snippets

Generated from the registry entry. cosmic-mcp has not run or reviewed this server; values in angle brackets are yours to fill in.

Run it locally (pypi)

uvx 'biolit==0.1.25'

Claude Desktop (claude_desktop_config.json)

{
  "mcpServers": {
    "biolit": {
      "args": [
        "biolit==0.1.25"
      ],
      "command": "uvx",
      "env": {
        "ANTHROPIC_API_KEY": "<your anthropic api key>",
        "LLM_MODEL": "<your llm model>",
        "LLM_PROVIDER": "<your llm provider>",
        "OPENAI_API_KEY": "<your openai api key>",
        "SEMANTIC_SCHOLAR_API_KEY": "<your semantic scholar api key>",
        "UNPAYWALL_EMAIL": "<your unpaywall email>"
      }
    }
  }
}

Claude Code

claude mcp add 'biolit' -- uvx 'biolit==0.1.25'

Cursor (.cursor/mcp.json)

{
  "mcpServers": {
    "biolit": {
      "args": [
        "biolit==0.1.25"
      ],
      "command": "uvx",
      "env": {
        "ANTHROPIC_API_KEY": "<your anthropic api key>",
        "LLM_MODEL": "<your llm model>",
        "LLM_PROVIDER": "<your llm provider>",
        "OPENAI_API_KEY": "<your openai api key>",
        "SEMANTIC_SCHOLAR_API_KEY": "<your semantic scholar api key>",
        "UNPAYWALL_EMAIL": "<your unpaywall email>"
      }
    }
  }
}

VS Code (.vscode/mcp.json)

{
  "servers": {
    "biolit": {
      "args": [
        "biolit==0.1.25"
      ],
      "command": "uvx",
      "env": {
        "ANTHROPIC_API_KEY": "<your anthropic api key>",
        "LLM_MODEL": "<your llm model>",
        "LLM_PROVIDER": "<your llm provider>",
        "OPENAI_API_KEY": "<your openai api key>",
        "SEMANTIC_SCHOLAR_API_KEY": "<your semantic scholar api key>",
        "UNPAYWALL_EMAIL": "<your unpaywall email>"
      },
      "type": "stdio"
    }
  }
}

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